NCBI GEO: archive for functional genomics data sets—update

نویسندگان

  • Tanya Barrett
  • Stephen E. Wilhite
  • Pierre Ledoux
  • Carlos Evangelista
  • Irene F. Kim
  • Maxim Tomashevsky
  • Kimberly A. Marshall
  • Katherine H. Phillippy
  • Patti M. Sherman
  • Michelle Holko
  • Andrey Yefanov
  • Hyeseung Lee
  • Naigong Zhang
  • Cynthia L. Robertson
  • Nadezhda Serova
  • Sean R. Davis
  • Alexandra Soboleva
چکیده

The Gene Expression Omnibus (GEO, http://www.ncbi.nlm.nih.gov/geo/) is an international public repository for high-throughput microarray and next-generation sequence functional genomic data sets submitted by the research community. The resource supports archiving of raw data, processed data and metadata which are indexed, cross-linked and searchable. All data are freely available for download in a variety of formats. GEO also provides several web-based tools and strategies to assist users to query, analyse and visualize data. This article reports current status and recent database developments, including the release of GEO2R, an R-based web application that helps users analyse GEO data.

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عنوان ژورنال:

دوره 41  شماره 

صفحات  -

تاریخ انتشار 2013